NMOD - Manual

1. Home

This page provides an overview of the basic information about NMOD.

2.1 Genome Data

This page displays the genomic information collected in NMOD and provides a search function. Users can view the information of the corresponding gene by selecting the species and entering the gene ID.

2.2 JBrowse

This page visualizes the genomic data collected in NMOD through JBrowse.

3. Transcriptome

This interface provides a GeneID search function, allowing users to input the gene ID information of the tobacco variety Nicotiana tabacum_Petite Havana SR1 to view transcriptome quantification and enrichment analysis results.

4. Variation

This interface displays the varieties of SNPs in NMOD and their quantity relationships.

5. Germplasm

This interface displays the geographical distribution information of germplasm resources in NMOD and provides a search function. Users can query by entering a search term or flipping through pages to select the target variety and view its germplasm resource information.

6. Gene-Families

This interface provides a visualization of the gene family counts for different varieties in NMOD and includes a search function. Users can select the target variety and Family Name to view the result information.