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Access all available genomic, transcriptomic, and phenotypic data for Nicotiana species.

Genomic Data

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Transcriptomic Data

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Variation Data

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Gene-Families Data

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Genomic Data

Species

Varieties

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Nicotiana attenuata   Nicotiana attenuata
Nicotiana benthamiana KLAB Nicotiana benthamiana_KLAB
Nicotiana benthamiana LAB360 Nicotiana benthamiana_LAB360
Nicotiana benthamiana LAB Nicotiana benthamiana_LAB(T2T)
Nicotiana benthamiana HZ1 Nicotiana benthamiana_LAB
Nicotiana benthamiana QLD Nicotiana benthamiana_QLD
Nicotiana glauca (tree tobacco)   Nicotiana glauca (tree tobacco)
Nicotiana knightiana   Nicotiana knightiana
Nicotiana noctiflora TW89 Nicotiana noctiflora_TW89
Nicotiana otophora   Nicotiana otophora
Nicotiana obtusifolia 1x inbred Nicotiana obtusifolia_1x inbred
Nicotiana paniculata   Nicotiana paniculata
Nicotiana rustica (Aztec tobacco)   Nicotiana rustica (Aztec tobacco)
Nicotiana sylvestris (wood tobacco)   Nicotiana sylvestris (wood tobacco)_GCA_000393655.2
Nicotiana sylvestris (wood tobacco)   Nicotiana sylvestris (wood tobacco)_GCA_965135595.1
Nicotiana tabacum (common tobacco) K326 Nicotiana tabacum (common tobacco)_K326
Nicotiana tabacum (common tobacco) Basma Xanthi Nicotiana tabacum (common tobacco)_Basma Xanthi
Nicotiana tabacum (common tobacco) TN90 Nicotiana tabacum (common tobacco)_TN90
Nicotiana tabacum (common tobacco) Petite Havana SR1 Nicotiana tabacum (common tobacco)_Petite Havana SR1
Nicotiana tabacum (common tobacco) ZY300 Nicotiana tabacum (common tobacco)_ZY300
Nicotiana tomentosiformis   Nicotiana tomentosiformis_GCA_000390325.3
Nicotiana tomentosiformis   Nicotiana tomentosiformis_GCA_965135585.1
Nicotiana undulata   Nicotiana undulata

Transcriptomic Data

Cultivar

Treatment

Tissue

gtf file

SRR ID

All gtf
Nicotiana benthamiana_HZ1 PVY and TMV root、stem、leaves gtf SRP447347PRJCA018115
Nicotiana benthamiana_LAB360 PVY and TMV root、stem、leaves gtf SRP447347PRJCA018115
Nicotiana benthamiana_QLD PVY and TMV root、stem、leaves gtf SRP447347PRJCA018115
Nicotiana benthamiana_LAB(T2T) PVY and TMV root、stem、leaves gtf SRP447347PRJCA018115
Nicotiana tabacum_SR1 Alternaria_alternata、Phytophthora_parasitica、PVY、Ralstonia_solanacearum stem、leaves gtf PRJCA014435PRJCA010360SRP224556SRP426533
Nicotiana tabacum_ZY300 Alternaria_alternata、Phytophthora_parasitica、PVY、Ralstonia_solanacearum stem、leaves gtf PRJCA014435PRJCA010360SRP224556SRP426533
Nicotiana tabacum L. cv. K326 Low-N-6h-replicate1 root gtf SRR7216515
Nicotiana tabacum L. cv. K326 Low-N-24h-replicate1 root gtf SRR7216516
Nicotiana tabacum L. cv. K326 Low-N-24h-replicate2 root gtf SRR7216517
Nicotiana tabacum L. cv. K326 Low-N-12h-replicate2 root gtf SRR7216518
Nicotiana tabacum L. cv. K326 Low-N-24h root gtf SRR7216519
Nicotiana tabacum L. cv. K326 Low-N-12h root gtf SRR7216520
Nicotiana tabacum L. cv. K326 Low-N-12h-replicate1 root gtf SRR7216521
Nicotiana tabacum L. cv. K326 High-N-6h-replicate1 root gtf SRR7216522
Nicotiana tabacum L. cv. K326 High-N-6h-replicate2 root gtf SRR7216523
Nicotiana tabacum L. cv. K326 High-N-24h root gtf SRR7216524
Nicotiana tabacum L. cv. K326 High-N-24h-replicate1 root gtf SRR7216525
Nicotiana tabacum L. cv. K326 High-N-12h-replicate1 root gtf SRR7216526
Nicotiana tabacum L. cv. K326 High-N-12h-replicate2 root gtf SRR7216527
Nicotiana tabacum L. cv. K326 control-replicate2 root gtf SRR7216528
Nicotiana tabacum L. cv. K326 High-N-12h root gtf SRR7216529
Nicotiana tabacum L. cv. K326 control root gtf SRR7216530
Nicotiana tabacum L. cv. K326 control-replicate1 root gtf SRR7216531
Nicotiana tabacum L. cv. K326 Low-N-6h-replicate2 root gtf SRR7216532
Nicotiana tabacum L. cv. K326 High-N-24h-replicate2 root gtf SRR7216533
Nicotiana tabacum L. cv. K326 High-N-6h root gtf SRR7216534
Nicotiana tabacum L. cv. K326 Normal growth, biological duplication 3 for mRNA analysis leaves gtf SRR8934905
Nicotiana tabacum L. cv. K326 Treated with NaCl for 24h 1, biological duplication 1 for mRNA analysis leaves gtf SRR8934906
Nicotiana tabacum L. cv. K326 Normal growth, biological duplication 1 for mRNA analysis leaves gtf SRR8934907
Nicotiana tabacum L. cv. K326 Normal growth, biological duplication 2 for mRNA analysis leaves gtf SRR8934908
Nicotiana tabacum L. cv. K326 Treated with NaHCO3 for 24h, biological duplication 1 for mRNA analysis leaves gtf SRR8934909
Nicotiana tabacum L. cv. K326 Treated with NaHCO3 for 24h, biological duplication 2 for mRNA analysis leaves gtf SRR8934910
Nicotiana tabacum L. cv. K326 Treated with NaCl for 24h 1, biological duplication 2 for mRNA analysis leaves gtf SRR8934911
Nicotiana tabacum L. cv. K326 Treated with NaCl for 24h 1, biological duplication 3 for mRNA analysis leaves gtf SRR8934912
Nicotiana tabacum L. cv. K326 Treated with NaHCO3 for 24h, biological duplication 3 for mRNA analysis leaves gtf SRR8934913
Nicotiana tabacum L. cv. K326 Normal growth tobacco treated with PEG for 24h, biological replicates 1 leaves gtf SRR8935692
Nicotiana tabacum L. cv. K326 Normal growth tobacco treated with PEG for 24h, biological replicates 2 leaves gtf SRR8935693
Nicotiana tabacum L. cv. K326 Normal growth tobacco treated with PEG for 24h, biological replicates 3 leaves gtf SRR8935694
Nicotiana tabacum L. cv. K326 COR treated tobacco under PEG stress for 24h, biological replicates 1 leaves gtf SRR8935695
Nicotiana tabacum L. cv. K326 COR treated tobacco under PEG stress for 24h, biological replicates 2 leaves gtf SRR8935696
Nicotiana tabacum L. cv. K326 COR treated tobacco under PEG stress for 24h, biological replicates 3 leaves gtf SRR8935697
Nicotiana tabacum L. cv. K326 Normal growth, biological replicates 1 leaves gtf SRR8935698
Nicotiana tabacum L. cv. K326 Normal growth, biological replicates 2 leaves gtf SRR8935699
Nicotiana tabacum L. cv. K326 Normal growth, biological replicates 3 leaves gtf SRR8935700
Nicotiana tabacum L. cv. K326 Treated with Coronatine for 24h, biological replicates 1 leaves gtf SRR8935701
Nicotiana tabacum L. cv. K326 Treated with Coronatine for 24h, biological replicates 2 leaves gtf SRR8935702
Nicotiana tabacum L. cv. K326 Treated with Coronatine for 24h, biological replicates 3 leaves gtf SRR8935703
Nicotiana tabacum L. cv. K326 CA-treated, biological duplication 3 for mRNA analysis leaves gtf SRR10873428
Nicotiana tabacum L. cv. K326 CA-treated, biological duplication 2 for mRNA analysis leaves gtf SRR10873429
Nicotiana tabacum L. cv. K326 CA-treated, biological duplication 1 for mRNA analysis leaves gtf SRR10873430
Nicotiana tabacum L. cv. K326 Non CA-treated, biological duplication 3 for mRNA analysis leaves gtf SRR10873431
Nicotiana tabacum L. cv. K326 Non CA-treated, biological duplication 2 for mRNA analysis leaves gtf SRR10873432
Nicotiana tabacum L. cv. K326 Non CA-treated, biological duplication 1 for mRNA analysis leaves gtf SRR10873433
Nicotiana tabacum L. cv. K326 MEL_D_1 leaves gtf SRR13423427
Nicotiana tabacum L. cv. K326 D_3 leaves gtf SRR13423428
Nicotiana tabacum L. cv. K326 D_2 leaves gtf SRR13423429
Nicotiana tabacum L. cv. K326 D_1 leaves gtf SRR13423430
Nicotiana tabacum L. cv. K326 MEL_3 leaves gtf SRR13423431
Nicotiana tabacum L. cv. K326 MEL_2 leaves gtf SRR13423432
Nicotiana tabacum L. cv. K326 MEL_1 leaves gtf SRR13423433
Nicotiana tabacum L. cv. K326 CK_3 leaves gtf SRR13423434
Nicotiana tabacum L. cv. K326 MEL_D_3 leaves gtf SRR13423435
Nicotiana tabacum L. cv. K326 MEL_D_2 leaves gtf SRR13423436
Nicotiana tabacum L. cv. K326 CK_2 leaves gtf SRR13423437
Nicotiana tabacum L. cv. K326 CK_1 leaves gtf SRR13423438
Nicotiana tabacum L. cv. K326 NS_1 leaves and roots gtf SRR16092993
Nicotiana tabacum L. cv. K326 TS_3 leaves and roots gtf SRR16092994
Nicotiana tabacum L. cv. K326 TS_2 leaves and roots gtf SRR16092995
Nicotiana tabacum L. cv. K326 TS_1 leaves and roots gtf SRR16092996
Nicotiana tabacum L. cv. K326 NW_3 leaves and roots gtf SRR16092997
Nicotiana tabacum L. cv. K326 NW_2 leaves and roots gtf SRR16092998
Nicotiana tabacum L. cv. K326 NW_1 leaves and roots gtf SRR16092999
Nicotiana tabacum L. cv. K326 TW_3 leaves and roots gtf SRR16093000
Nicotiana tabacum L. cv. K326 NS_3 leaves and roots gtf SRR16093001
Nicotiana tabacum L. cv. K326 NS_2 leaves and roots gtf SRR16093002
Nicotiana tabacum L. cv. K326 TW_2 leaves and roots gtf SRR16093003
Nicotiana tabacum L. cv. K326 TW_1 leaves and roots gtf SRR16093004
Nicotiana tabacum L. cv. NC55 NC55-CK1 leaves gtf SRR21492591
Nicotiana tabacum L. cv. NC55 NC55-Cd3 leaves gtf SRR21492592
Nicotiana tabacum L. cv. NC55 NC55-Cd2 leaves gtf SRR21492593
Nicotiana tabacum L. cv. NC55 NC55-Cd1 leaves gtf SRR21492594
Nicotiana tabacum L. cv. K326 K326-CK3 leaves gtf SRR21492595
Nicotiana tabacum L. cv. K326 K326-CK2 leaves gtf SRR21492596
Nicotiana tabacum L. cv. K326 K326-CK1 leaves gtf SRR21492597
Nicotiana tabacum L. cv. K326 K326-Cd3 leaves gtf SRR21492598
Nicotiana tabacum L. cv. NC55 NC55-CK3 leaves gtf SRR21492599
Nicotiana tabacum L. cv. NC55 NC55-CK2 leaves gtf SRR21492600
Nicotiana tabacum L. cv. K326 K326-Cd2 leaves gtf SRR21492601
Nicotiana tabacum L. cv. K326 K326-Cd1 leaves gtf SRR21492602

Variation Data

ID

Varieties

Outcome Document

All_vcf
Ni1 Yun YAN 116 HAO vcf
Ni2 CHANG BO HUANG vcf
Ni3 CUI BI 1 HAO vcf
Ni4 GUI YAN 11 HAO vcf
Ni5 HONG DA vcf
Ni6 JI YAN 7 HAO vcf
Ni7 LONG JIANG 911 vcf
Ni8 YONG DING 1 HAO vcf
Ni9 YUN YAN 85 vcf
Ni10 YUN YAN 317 vcf
Ni11 ZHONG YAN 90 vcf
Ni12 ZUN YAN 1 HAO vcf
Ni13 K326 vcf
Ni14 K346 vcf
Ni15 NC82 vcf
Ni16 NC89 vcf
Ni17 RG11 vcf
Ni18 RG17 vcf
Ni19 G28 vcf
Ni20 G80 vcf
Ni21 G140 vcf
Ni22 V2 vcf
Ni23 ZHONG YAN 100 vcf
Ni24 YUN YAN 110 vcf
Ni25 YUN YAN 97 vcf
Ni26 AN YAN 1 HAO vcf
Ni27 QIN YAN 96 vcf
Ni28 XIANG YAN 4 HAO vcf
Ni29 YUE YAN 98 vcf
Ni30 A QIAO MI MU vcf
Ni31 AN HUI DA BAI GENG vcf
Ni32 AN QIU MAN WU XIANG vcf
Ni33 BAI HUA 205 vcf
Ni34 BAO XIAN HUANG vcf
Ni35 BEI LIU 1 HAO vcf
Ni36 BO HE YAN vcf
Ni37 CHANG MAO HUANG vcf
Ni38 CHUN LEI 3 HAO vcf
Ni39 CUN JING YAN vcf
Ni40 DA BAI JIN 599 vcf
Ni41 DA HUANG JIN 0398 vcf
Ni42 DA WO SUN YE vcf
Ni43 DAN YU 2 HAO vcf
Ni44 FENG CHENG HUANG JIN vcf
Ni45 FU QUAN HOU JIE BA vcf
Ni46 GE XIN 3 HAO vcf
Ni47 HUANG MIAO WAI JIN vcf
Ni48 HUANG MIAO YU vcf
Ni49 HUANG MIAO YU 2235 vcf
Ni50 HUANG QI YAN vcf
Ni51 JIAN YE LIU vcf
Ni52 JIN HUANG LIU vcf
Ni53 JIN XING 6007 vcf
Ni54 JIN TAI 76 vcf
Ni55 JING YE HUANG vcf
Ni56 LAO LAI HONG vcf
Ni57 LIAO YAN 1 HAO vcf
Ni58 LIN QU 2 HAO vcf
Ni59 LIU YE QING vcf
Ni60 LIU YE YAN vcf
Ni61 LING NONG 1 HAO vcf
Ni62 LONG JIANG 851 vcf
Ni63 LU YI 6 HAO vcf
Ni64 LUO DI HUANG vcf
Ni65 MA JIANG BAI HUA YAN vcf
Ni66 MEI FU 4 HAO vcf
Ni67 MU DAN 81-56 vcf
Ni68 NAN XIONG 118 vcf
Ni69 PAN YUAN HUANG vcf
Ni70 PIAN JIN HUANG vcf
Ni71 PING YAN 2 HAO vcf
Ni72 QIAO ZHUANG DUO YE vcf
Ni73 QING ZHOU DA BAI JIN vcf
Ni74 QING SHENG 2 HAO vcf
Ni75 REN SHEN YAN vcf
Ni76 SHU BA 2125 vcf
Ni77 SHU BA YAN vcf
Ni78 SONG BIAN PIN ZHONG vcf
Ni79 TAI YAN 7 HAO(T.T.7) vcf
Ni80 TAI YAN 8 HAO(T.T.8) vcf
Ni81 TAO LIU ZI vcf
Ni82 WAI BA ZI vcf
Ni83 XU JIN 1 HAO vcf
Ni84 WO LI HUANG 0782 vcf
Ni85 WU GONG vcf
Ni86 XIANG YUN KAO YAN vcf
Ni87 XIAO HUANG JIN 1025 vcf
Ni88 XUAN WEI BAI HUA YAN vcf
Ni89 YAN YAN 97 vcf
Ni90 YAN BIAN ZI vcf
Ni91 YAN YAN 3 HAO vcf
Ni92 YUAN YE YAN vcf
Ni93 YUN HUA 1 HAO vcf
Ni94 YUN YAN 1 HAO vcf
Ni95 YUN YAN 2 HAO vcf
Ni96 YUN YAN 3 HAO vcf
Ni97 ZHOU YE ZI vcf
Ni98 8602-123 vcf
Ni99 86-3002 vcf
Ni100 C151 vcf
Ni101 Cg7900454 vcf
Ni102 SH.86-1 vcf
Ni103 BAI HUA YUN YAN 87 vcf
Ni104 HONG HUA YUN YAN 85 vcf
Ni105 ZHU SHA YAN vcf
Ni106 Cabbage vcf
Ni107 Cash vcf
Ni108 Delcrest vcf
Ni109 Dukane vcf
Ni110 Gold Dollar vcf
Ni111 Hicks broad leaf vcf
Ni112 Jamaica Wrapper vcf
Ni113 Warne vcf
Ni114 White Mammoth vcf
Ni115 White Stem Orinoco vcf
Ni116 Bava vcf
Ni117 Cautcher vcf
Ni118 ClemsonPD4 vcf
Ni119 Coker48 vcf
Ni120 Coker51 vcf
Ni121 Coker86 vcf
Ni122 Coker139 vcf
Ni123 Coker176 vcf
Ni124 Coker187 vcf
Ni125 Coker187-hicks vcf
Ni126 Coker316 vcf
Ni127 Coker258 vcf
Ni128 Coker298 vcf
Ni129 Coker319 vcf
Ni130 Coker347 vcf
Ni131 Coker371-gold vcf
Ni132 CU236 vcf
Ni133 Delgold vcf
Ni134 Dixie Bright27 vcf
Ni135 Dixie Bright101 vcf
Ni136 Dixie Bright102 vcf
Ni137 Dixie Bright244 vcf
Ni138 GL939 vcf
Ni139 Golden Wilt vcf
Ni140 Hicks vcf
Ni141 Hingory vcf
Ni142 I-35 vcf
Ni143 Islangold vcf
Ni144 K149 vcf
Ni145 K317 vcf
Ni146 K358 vcf
Ni147 K394 vcf
Ni148 K399 vcf
Ni149 K730 vcf
Ni150 Kutsaga51E vcf
Ni151 MC101 vcf
Ni152 Mc Nair 10 vcf
Ni153 Mc Nair 135 vcf
Ni154 Mc Nair 944 vcf
Ni155 Newdel vcf
Ni156 NC37NF vcf
Ni157 NC27NF vcf
Ni158 NC95 vcf
Ni159 NC567 vcf
Ni160 NC606 vcf
Ni161 NC729 vcf
Ni162 NC810 vcf
Ni163 NC925 vcf
Ni164 NC1071(GH14-101) vcf
Ni165 NC1108 vcf
Ni166 NC2326(GH14-100) vcf
Ni167 NC22NF vcf
Ni168 NC TG 55 vcf
Ni169 NCYOU ZHI ZHONG vcf
Ni170 Oxford 1-181 vcf
Ni171 Oxford3 vcf
Ni172 OX414 vcf
Ni173 Oxford26 vcf
Ni174 Oxford207 vcf
Ni175 P3 vcf
Ni176 PD335 vcf
Ni177 Pelo DeOro P-1-6 vcf
Ni178 Q1232:Virginia Gold vcf
Ni179 ReamsC73 vcf
Ni180 SC58 vcf
Ni181 SC72 vcf
Ni182 SpeightG15 vcf
Ni183 SpeightG10 vcf
Ni184 SpeightG36 vcf
Ni185 SpeightG70 vcf
Ni186 SpeightG168 vcf
Ni187 Speight Nf3 vcf
Ni188 Stolac 17 vcf
Ni189 TL106 vcf
Ni190 Vamorr48 vcf
Ni191 Vesta5 vcf
Ni192 Vesta30 vcf
Ni193 Vesta33 vcf
Ni194 Virginia Toyer vcf
Ni195 CHAO XIAN KANG CHI vcf
Ni196 TAI GUO FEI JI NI YA vcf
Ni197 TANG SANG NI YA YAN vcf
Ni198 XUAN DONG QU vcf
Ni199 SUO MA LI 2 HAO vcf
Ni200 SHUANG SHAN 2 HAO vcf
Ni201 ZAN BI YA YAN CAO vcf
Ni202 BAI HUA TIE GAN ZI vcf
Ni203 HUANG LIANG PI PA LIU vcf
Ni204 QIAN JIANG WU YAN vcf
Ni205 QUAN YAN vcf
Ni206 YI SHUI XIANG YAN vcf
Ni207 XI CANG TU YAN vcf
Ni208 TIE BAN QING GENG vcf
Ni209 TONG JING YAN vcf
Ni210 XI PO SHAI YAN vcf
Ni211 XI YE SHU JIE YAN vcf
Ni212 Raja vcf
Ni213 Kenek vcf
Ni214 Virginia309 vcf
Ni215 Subsample of T180 vcf
Ni216 5932 vcf
Ni217 VA81 vcf
Ni218 YIN NI XUE JIA BAO PI vcf
Ni219 Poquonock vcf
Ni220 Scantic vcf
Ni221 TN90 vcf
Ni222 99K521 vcf
Ni223 Burley21 vcf
Ni224 BYS vcf
Ni225 Kentucky14 vcf
Ni226 L-8 vcf
Ni227 Burley Wloski vcf
Ni228 Wohlsdorfer Burley vcf
Ni229 SoTa2 vcf
Ni230 Izmir vcf
Ni231 Kokulu Izmir vcf
Ni232 Samsun NN vcf
Ni233 WAN YE vcf
Ni234 4386 L-5-6 vcf
Ni235 C 39-193(tab.X rus.) vcf
Ni236 Kostoff White Seed #14 vcf
Ni237 Campanulata vcf
Ni238 Hasankeyf vcf
Ni239 TR 78 vcf

Gene-Families Data

Species

Varieties

Download(All)

Nicotiana benthamiana LAB360 Nicotiana benthamiana_LAB360
Nicotiana benthamiana LAB Nicotiana benthamiana_LAB(T2T)
Nicotiana benthamiana HZ1 Nicotiana benthamiana_LAB
Nicotiana benthamiana QLD Nicotiana benthamiana_QLD
Nicotiana sylvestris (wood tobacco)   Nicotiana sylvestris (wood tobacco)_GCA_965135595.1
Nicotiana tabacum (common tobacco) K326 Nicotiana tabacum (common tobacco)_K326
Nicotiana tabacum (common tobacco) TN90 Nicotiana tabacum (common tobacco)_TN90
Nicotiana tabacum (common tobacco) Petite Havana SR1 Nicotiana tabacum (common tobacco)_Petite Havana SR1
Nicotiana tabacum (common tobacco) ZY300 Nicotiana tabacum (common tobacco)_ZY300
Nicotiana tomentosiformis   Nicotiana tomentosiformis_GCA_965135585.1