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Nicotiana Genome Data

Here you can find detailed information about the Nicotiana reference genome. This includes genome assembly statistics, gene annotations, and other relevant genomic data. The genome data is essential for understanding the genetic basis of Nicotiana species and can be used for various research purposes such as gene function analysis, genetic mapping, and breeding improvement.

Genome Data Details

Species Varieties Source GenBank Assembly Reference Genome Size (Gb) Scaffold N50 Contig N50 GC % Assembly Level
Nicotiana attenuata NCBI GCA_030864195.1 https://doi.org/10.1073/pnas.2308500120 2.07 198.4 Mb 3.4 Mb 40.5 Chromosome
Nicotiana benthamiana KLAB NCBI GCA_034376525.1 - 2.63 142.6 Mb 140.7 Mb 38 Chromosome
Nicotiana benthamiana LAB360 Sol Genomics Network 2.67 Chromosome
Nicotiana benthamiana LAB NGDC https://doi.org/10.1038/s41477-024-01849-y 2.67 Chromosome(T2T)
Nicotiana benthamiana HZ1 NGDC https://doi.org/10.1016/j.molp.2024.01.008 2.76 Chromosome
Nicotiana benthamiana QLD Nicotiana benthamiana Genome & Transcriptome https://doi.org/10.1038/s41477-023-01489-8 2.76 Chromosome
Nicotiana glauca (tree tobacco) NCBI GCA_026770625.1 - 3.39 91.9 Kb 21.8 Kb 39 Scaffold
Nicotiana knightiana NCBI GCA_005239525.1 https://doi.org/10.1186/s12864-018-5241-5 2.18 82.7 Kb 28.1 Kb 39.5 Scaffold
Nicotiana noctiflora TW89 NCBI GCA_032618575.1 - 1.97 - 222.8 Kb 39.5 Contig
Nicotiana obtusifolia 1x inbred NCBI GCA_002018475.1 https://doi.org/10.3390/ijms22041783
https://doi.org/10.1186/s12864-019-6058-6
https://doi.org/10.1073/pnas.1700073114 		1.15 134.1 Kb 39.2 Kb 38.5 Scaffold
Nicotiana otophora NCBI GCA_000715115.1 https://doi.org/10.1038/ncomms4833 2.61 26.6 Kb 11.3 Kb 39 Scaffold
Nicotiana paniculata NCBI GCA_005239505.1 https://doi.org/10.1186/s12864-018-5241-5 2.08 52.8 Kb 32.3 Kb 39.5 Scaffold
Nicotiana rustica (Aztec tobacco) NCBI GCA_005239535.1 https://doi.org/10.1186/s12864-018-5241-5 4.01 72.8 Kb 14.5 Kb 39.5 Scaffold
Nicotiana sylvestris (wood tobacco) NCBI GCA_000393655.2 https://doi.org/10.1038/s41597-024-02965-2
https://doi.org/10.1186/gb-2013-14-6-r60
https://doi.org/10.1007/s00438-005-0092-6 		2.18 188.6 Mb 15.0 Mb 39 Chromosome
Nicotiana sylvestris (wood tobacco) NCBI GCA_965135595.1 https://doi.org/10.1038/s41588-025-02126-0 2.25 192.4 Mb 190 Mb 39 Chromosome
Nicotiana tabacum (common tobacco) Basma Xanthi NCBI GCA_000715095.1 https://doi.org/10.1038/ncomms4833 3.58 32.9 Kb 21.7 Kb 39 Scaffold
Nicotiana tabacum (common tobacco) K326 NCBI GCA_000715075.2 https://doi.org/10.1038/s41597-024-02965-2
https://doi.org/10.1038/ncomms4833 		3.76 166.6 Mb 11.8 Mb 39 Chromosome
Nicotiana tabacum (common tobacco) Petite Havana SR1 NGDC https://doi.org/10.1016/j.molp.2024.01.008 4.07 Chromosome
Nicotiana tabacum (common tobacco) TN90 NCBI GCF_000715135.1 https://doi.org/10.1038/ncomms4833 3.54 66.2 Kb 39.4 Kb 39 Scaffold
Nicotiana tabacum (common tobacco) ZY300 NCBI GCA_965120285.1 https://doi.org/10.1038/s41588-025-02126-0 3.95 169.6 Mb 35.1 Mb 39 Chromosome
Nicotiana tomentosiformis NCBI GCA_000390325.3 https://doi.org/10.1038/s41597-024-02965-2
https://doi.org/10.1186/gb-2013-14-6-r60
https://doi.org/10.1007/s00438-005-0092-6 		1.64 139.0 Mb 10.6 Mb 39 Chromosome
Nicotiana tomentosiformis NCBI GCA_965135585.1 https://doi.org/10.1038/s41588-025-02126-0 2.12 189.5 Mb 170.5 Mb 39 Scaffold
Nicotiana undulata NCBI GCA_005239495.1 https://doi.org/10.1186/s12864-018-5241-5 1.81 61.9 Kb 28.4 Kb 40 Scaffold
Showing 1 to 6 of 24 entries

Gene Search

Search for specific genes in the Nicotiana genome by selecting a species and entering a gene ID.

Enter multiple gene IDs separated by commas or new lines.